We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
3289.6
nTPM
HPA Brain:
2622.4
nTPM
GTEx:
3289.6
nTPM
FANTOM5:
6870.6
Scaled Tags Per Million
Mouse:
3469.3
nTPM
Allen mouse:
10.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
2622.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 1915.6
2019
Male, age 18, unknown
2374.9
2828
Female, age 72, unknown
2347.1
1833
Male, age 53, unknown
2187.9
1870
Female, age 42, unknown
2153.7
2411
Female, age 72, unknown
2117.5
1830
Male, age 51, unknown
2046.8
2586
Male, age 75, left hemisphere
1822.5
2219
Male, age 76, both hemispheres
1446.8
1827
Male, age 72, unknown
1442.6
2666
Male, age 74, left hemisphere
1215.8
Dorsal raphe nucleus nTPM: 1851.9
2750
Male, age 76, both hemispheres
2106.9
2016
Female, age 72, unknown
1922.7
2298
Female, age 72, unknown
1815.9
1828
Male, age 53, unknown
1760.4
2047
Male, age 72, unknown
1653.8
Inferior colliculus nTPM: 1611.1
1890
Male, age 53, unknown
1637.8
1848
Female, age 42, unknown
1627.3
2849
Male, age 72, unknown
1610.1
2097
Female, age 72, unknown
1569.3
Median raphe nucleus nTPM: 1712.1
2220
Male, age 76, midline
1712.1
Periaquaductal grey, anterior nTPM: 1530.9
1947
Male, age 18, unknown
1569.3
2502
Female, age 75, unknown
1533.1
1795
Male, age 51, unknown
1490.4
Periaquaductal grey, dorsal nTPM: 1508.4
2850
Male, age 76, both hemispheres
1699.4
2464
Female, age 72, unknown
1576.7
1831
Male, age 72, unknown
1486.0
1840
Male, age 53, unknown
1271.7
Periaquaductal grey, lateral nTPM: 1662.4
2140
Male, age 76, both hemispheres
1829.0
2053
Male, age 18, unknown
1592.7
2272
Male, age 74, both hemispheres
1565.4
Pretectal area nTPM: 1848.0
2667
Female, age 75, unknown
2457.7
1817
Female, age 42, unknown
2128.8
2316
Male, age 76, right hemisphere
1982.6
1815
Male, age 53, unknown
1979.5
2273
Male, age 74, both hemispheres
1972.3
1944
Female, age 72, unknown
1800.5
2007
Male, age 72, unknown
1781.7
2407
Male, age 75, both hemispheres
1760.3
2224
Female, age 72, unknown
1574.8
2825
Male, age 18, unknown
1474.3
1816
Male, age 51, unknown
1415.0
Red nucleus nTPM: 2622.4
1904
Male, age 53, unknown
3110.3
2823
Male, age 76, right hemisphere
3006.5
2769
Male, age 72, unknown
2962.0
1865
Male, age 51, unknown
2939.5
2227
Male, age 72, unknown
2925.7
1821
Female, age 72, unknown
2845.6
2503
Female, age 72, unknown
2732.2
1954
Female, age 42, unknown
2681.7
2785
Male, age 18, unknown
2673.7
2725
Female, age 75, unknown
2063.4
2588
Male, age 74, left hemisphere
1872.1
2584
Male, age 75, left hemisphere
1655.5
Substantia nigra nTPM: 1683.7
1889
Female, age 72, unknown
2107.8
1851
Male, age 51, unknown
2052.9
2699
Male, age 18, unknown
1999.9
1916
Female, age 42, unknown
1776.8
2583
Male, age 75, right hemisphere
1730.9
2590
Female, age 75, unknown
1695.5
2409
Female, age 72, unknown
1686.3
1941
Male, age 53, unknown
1395.9
2241
Male, age 72, unknown
1323.4
2665
Male, age 74, both hemispheres
1068.0
Superior colliculus nTPM: 1825.7
1995
Male, age 72, unknown
2569.3
1913
Female, age 42, unknown
2285.5
2087
Female, age 72, unknown
1843.2
1796
Male, age 53, unknown
1811.2
2587
Male, age 74, left hemisphere
1803.3
1895
Male, age 76, right hemisphere
1748.4
1839
Male, age 51, unknown
1705.5
2668
Female, age 75, unknown
1619.3
2664
Male, age 75, both hemispheres
1455.5
2261
Male, age 18, unknown
1415.5
Ventral tegmental area nTPM: 1819.0
2223
Female, age 72, unknown
2007.9
2410
Female, age 72, unknown
1970.8
1915
Female, age 42, unknown
1937.6
2021
Male, age 53, unknown
1689.2
2218
Male, age 76, both hemispheres
1678.8
1942
Male, age 51, unknown
1629.4
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
3289.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 3289.6
Samples: 139
Max nTPM: 8717.4
Min nTPM: 747.3
Std nTPM: 1293.4
Median nTPM: 3092.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
8717.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
7518.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
6740.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
6495.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
6478.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
6449.3
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
6233.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
5930.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
5612.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
5502.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
5384.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
5274.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
5240.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
5191.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
5094.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
5038.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
4740.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
4722.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
4716.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
4695.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
4541.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
4465.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
4218.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
4154.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
4046.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
4042.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
4002.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
3980.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
3945.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
3912.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
3892.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
3865.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
3863.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
3740.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
3708.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
3653.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
3637.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
3625.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
3576.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
3563.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
3556.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
3553.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
3528.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
3522.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
3499.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
3490.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
3477.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
3477.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
3437.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
3416.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
3409.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
3385.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
3379.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
3366.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
3347.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
3284.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
3281.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
3262.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
3261.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
3235.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
3225.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
3195.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
3191.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
3174.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
3170.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
3115.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
3109.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
3109.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
3105.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
3092.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
3076.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
3075.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
3067.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
3044.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
3040.0
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
2972.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
2957.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
2934.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
2844.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
2837.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
2831.5
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
2804.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
2791.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
2789.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
2787.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
2783.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
2753.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
2752.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
2704.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
2689.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
2674.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
2634.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
2629.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
2620.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
2612.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
2610.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
2603.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
2551.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
2549.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
2541.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
2539.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
2536.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
2528.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
2522.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
2494.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
2460.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
2460.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
2445.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
2434.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
2393.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
2388.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
2385.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
2382.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
2374.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
2324.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
2263.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
2224.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
2178.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
2175.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
2175.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
2106.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
2095.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
2092.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
2080.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
2061.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
2021.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
1973.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
1894.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
1834.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
1775.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
1658.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
1637.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
1567.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
1549.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
1533.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
1371.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
1164.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
972.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
747.3
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
3469.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 3469.3
Samples: 4
Max nTPM: 4054.6
Min nTPM: 3026.8
Sample A
Male
4054.6
Sample B
Male
3168.4
Sample C
Female
3627.4
Sample D
Female
3026.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.